Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927652.1_cds_XP_016475417.1_67353
CDS Infomation

[gene=LOC107797074] [db_xref=GeneID:107797074] [protein=glycerophosphodiester phosphodiesterase GDPDL3-like] [protein_id=XP_016475417.1] [location=join(4302..4352,5170..5485,6538..6653,6860..7361,8080..8118,8706..8990,10134..10276,11319..11796,12188..12483)] [gbkey=CDS]
Sequence

ATGACGCACACCGATCTTTTTCTCACTAATGCTGTGATACCATGTGAGAAGTGTTTTTGT
TTTTGCTTTGCAGGAGACGCACCATTAGTAATAGCCCGTGGTGGATTTTCTGGATTATTT
CCTGATTCAAGCTATGATGCCTATATGGTGGCAATGGAAACTAGCTTGGCCAATGTGATT
GCTTGGTGTGATGTCCAACTAACCAAAGATGGGGTCGGCATCTGCTTACCTGACCTCAAG
CTTGACAATGCATCTGACATTGATGTGTACTTCAAAAACAAGAAGAGTAAATACTCAGTG
AATGGAGTTCCAATGCAAGGATGGTTTTCTATAGATTTCAACTTCAAGGATTTGGCGCCT
GTCACCTTGAGGCAAGGAGTTCTTTCCCGGACCCCTAAATTTGATGGCACACAGCAGAAA
ATTCTAACTGTCCTGGATGTGATTAACAAAGTCAAACCTCCAGGATTATGGTTGAATATC
CAGCATGACACCTTCTTCAGCCAGCACAATCTGAGTATGAGAAGCTTTATTATAACCCTG
TCCAGAAGTGTTATCATCAACTATATTTCATCACCTGAGGTGAATTTCCTCAGAAGTATT
GTGGCACGATTCGATCCACAAGTTACAAAACTCGTTTTCCGGTTTCTCGGACAGGATGAT
GTTGAGCCTTCAACAAATCAAACATATGGTTCTTTATTGAAGAATCTCACATTTATCAAT
ACATTTGCCTCTGGAATTCTTGTTCCCAAATCTTATATTTGGCCGGTGGACAACTCACTC
TACTTACAGCCACATACATCACTTGTCTTAGATGCTCATGAAGAAGGTCTTCAGATTTTT
GCGGCGGAGTTCGTAAATGATGTGCCTTTTGCTTACAATTACAGCTATGATCCTGCAACT
GAGTATTTGTCCTTTATTGACAATGGAAACTTCTCTGTGGACGGAGTACTGTCCGACTTC
CCAATAACTCCATCAGCAACAATAGATTGCTTCACTCATTTGGGCAAGAATGATAAACCT
CAAGCAAAGCTTCTGATTATGACATCTGAAGGAGCGAGTGGAGACTATCCGGGTTGTACT
GATTTGGCATATACCAAAGCTGCTATGGATGGTGCAGATGTTCTTGGCTGTCCTGTCCAA
ATGGCAAAGGATGGAATACCCTTTTGCCTGGGTTCTATTAATTTGATAGATAAGACTACA
GTTGCTCAATCGCCCTTCGACAATATTGGTAGTGCTGTCCCAGAGCTTAACATAACAAAT
GGAATATTCACCTTTAACCTTACTTGGGATGAGATTAAGAGCCTGAAACCGGCAATATCA
AACCCATGGTCAGAGTTTAGATTGTACCGAAATCCAAAAGCCAGAAATGACGGAAACTTC
GTGTCGTTAGTGGATTTCTTGACATATGCAAAAAATGCCACAACTGTATCTGGTGTGATG
ATCGGCATAGAGAATGCAGCTTACCTGGCAAAGCATGGATTTGGCGTGACTGCTGCTGTT
CTTAAAGCCTTGAGCAGCGCTGCTTACAATAATCAGTCAGCCAAGAAAGTTATGATCCAA
TCAACTGACAGTTCGGTTCTGAAAGAATTTAAGAAAAGCCAGTATGAACTTGTTTATAGG
GTTGCTGATGATATCAGTGATATTAAGATCTCAACTATATCCGAGATCAAGAGCTTTGCT
AGTTCTGTAATTGTAACCAAAAAATCTGTTTTTCCAAGTGAGGAAGAATTTCTCATTGGG
CAAACAGATGTGGTGCAGAAGCTGCAGTCATCGAATCTCCCAGTGTACGCACGACTCTTT
AATAATGAATTTGTGTCTCAAGCATGGGATTTTTTCTCAGATTCATCTGTCGAGATAAAC
AACTATATCTCTGGAGCTGGTATTGATGGTATTATAACAGAATTCCCCGGCACAGCTGCT
AGATACAGAAGGAACCGTTGTTTGGGTTACAAAGACCGACCATTGTATCTTAGCCCTGTT
GAACCTGGAGGTCTCCTACAATTCATGGCTCCTCAGTTGTTGCCAGCAGCTGAAGCTCCC
AATCCAATACTTACTGATAGTGATGTGGTTGAGCCACCTCTACCTCCTGTTGCAAAGATC
ACTCCTACTGCTGGCAATGAGTCTATAGCTGCAGCTCCCACCCCTCCAAGTGGTCAATCC
TCGGTTGTGGCTGGCGTTTTCACAAGTTGCGTCGCCATTCTTCTTGCCAATCTTGTGATC
TATTGA

Peptide Sequence

PEP ID

XP_016475417.1
PEP Infomation

PREDICTED: glycerophosphodiester phosphodiesterase GDPDL3-like [Nicotiana tabacum]
Sequence

MTHTDLFLTNAVIPCEKCFCFCFAGDAPLVIARGGFSGLFPDSSYDAYMVAMETSLANVI
AWCDVQLTKDGVGICLPDLKLDNASDIDVYFKNKKSKYSVNGVPMQGWFSIDFNFKDLAP
VTLRQGVLSRTPKFDGTQQKILTVLDVINKVKPPGLWLNIQHDTFFSQHNLSMRSFIITL
SRSVIINYISSPEVNFLRSIVARFDPQVTKLVFRFLGQDDVEPSTNQTYGSLLKNLTFIN
TFASGILVPKSYIWPVDNSLYLQPHTSLVLDAHEEGLQIFAAEFVNDVPFAYNYSYDPAT
EYLSFIDNGNFSVDGVLSDFPITPSATIDCFTHLGKNDKPQAKLLIMTSEGASGDYPGCT
DLAYTKAAMDGADVLGCPVQMAKDGIPFCLGSINLIDKTTVAQSPFDNIGSAVPELNITN
GIFTFNLTWDEIKSLKPAISNPWSEFRLYRNPKARNDGNFVSLVDFLTYAKNATTVSGVM
IGIENAAYLAKHGFGVTAAVLKALSSAAYNNQSAKKVMIQSTDSSVLKEFKKSQYELVYR
VADDISDIKISTISEIKSFASSVIVTKKSVFPSEEEFLIGQTDVVQKLQSSNLPVYARLF
NNEFVSQAWDFFSDSSVEINNYISGAGIDGIITEFPGTAARYRRNRCLGYKDRPLYLSPV
EPGGLLQFMAPQLLPAAEAPNPILTDSDVVEPPLPPVAKITPTAGNESIAAAPTPPSGQS
SVVAGVFTSCVAILLANLVIY

Transcript Sequence

Gene sequence data has not been registered.